IL_7RR5_086
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GAAUG*CGC
- Length
- 8 nucleotides
- Bulged bases
- 7RR5|1|C1|U|2209
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_086 not in the Motif Atlas
- Homologous match to IL_8C3A_092
- Geometric discrepancy: 0.5137
- The information below is about IL_8C3A_092
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58579.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
7RR5|1|C1|G|2206
7RR5|1|C1|A|2207
7RR5|1|C1|A|2208
7RR5|1|C1|U|2209
7RR5|1|C1|G|2210
*
7RR5|1|C1|C|2235
7RR5|1|C1|G|2236
7RR5|1|C1|C|2237
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain 5
- Eukaryotic translation initiation factor 5A
- Chain C2
- Small subunit ribosomal RNA; SSU rRNA
- Chain L1
- 60S ribosomal protein L1
- Chain LA
- 60S ribosomal protein L2-B
- Chain SB
- RPS1A isoform 1
Coloring options: