3D structure

PDB id
7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of ribosomal complex bound with Rbg1/Tma46
Experimental method
ELECTRON MICROSCOPY
Resolution
3.23 Å

Loop

Sequence
GC*GCAU
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7RR5_088 not in the Motif Atlas
Homologous match to IL_8C3A_094
Geometric discrepancy: 0.0803
The information below is about IL_8C3A_094
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_22551.1
Basepair signature
cWW-L-cWW-L
Number of instances in this motif group
9

Unit IDs

7RR5|1|C1|G|2276
7RR5|1|C1|C|2277
*
7RR5|1|C1|G|2307
7RR5|1|C1|C|2308
7RR5|1|C1|A|2309
7RR5|1|C1|U|2310

Current chains

Chain C1
25S rRNA

Nearby chains

Chain Ln
60S ribosomal protein L41-A
Chain P
Transfer RNA; tRNA

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1661 s