IL_7RR5_093
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GA*UACC
- Length
- 6 nucleotides
- Bulged bases
- 7RR5|1|C1|A|2808
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_093 not in the Motif Atlas
- Homologous match to IL_5TBW_094
- Geometric discrepancy: 0.1195
- The information below is about IL_5TBW_094
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_18604.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 46
Unit IDs
7RR5|1|C1|G|2412
7RR5|1|C1|A|2413
*
7RR5|1|C1|U|2807
7RR5|1|C1|A|2808
7RR5|1|C1|C|2809
7RR5|1|C1|C|2810
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain 5
- Eukaryotic translation initiation factor 5A
- Chain LA
- 60S ribosomal protein L2-B
- Chain P
- Transfer RNA; tRNA
Coloring options: