IL_7RR5_104

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GCU*GAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RR5_104 not in the Motif Atlas

Geometric match to IL_7RQB_017

Geometric discrepancy: 0.1974

The information below is about IL_7RQB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

7RR5|1|C1|G|2824
7RR5|1|C1|C|2825
7RR5|1|C1|U|2826
*
7RR5|1|C1|G|2863
7RR5|1|C1|A|2864
7RR5|1|C1|U|2865

Current chains

Chain C1

25S rRNA

Nearby chains

Chain A

Transfer RNA; tRNA

Chain LI

RPL10 isoform 1

Chain Lb

RPL29 isoform 1