IL_7RR5_113
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GAU*ACC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_113 not in the Motif Atlas
- Geometric match to IL_5TBW_112
- Geometric discrepancy: 0.1541
- The information below is about IL_5TBW_112
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7RR5|1|C1|G|2918
7RR5|1|C1|A|2919
7RR5|1|C1|U|2920
*
7RR5|1|C1|A|2926
7RR5|1|C1|C|2927
7RR5|1|C1|C|2928
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain A
- Transfer RNA; tRNA
- Chain LB
- RPL3 isoform 1
- Chain LV
- 60S ribosomal protein L23-B
Coloring options: