IL_7RR5_120

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CU*AUUG

Length

6 nucleotides

Bulged bases

7RR5|1|C1|U|3078, 7RR5|1|C1|U|3079

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RR5_120 not in the Motif Atlas

Homologous match to IL_8C3A_128

Geometric discrepancy: 0.1222

The information below is about IL_8C3A_128

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24807.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

7RR5|1|C1|C|3063
7RR5|1|C1|U|3064
*
7RR5|1|C1|A|3077
7RR5|1|C1|U|3078
7RR5|1|C1|U|3079
7RR5|1|C1|G|3080

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LR

60S ribosomal protein L19-A

Chain Ld

60S ribosomal protein L31-A