IL_7RR5_194
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- CCU*GCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_194 not in the Motif Atlas
- Homologous match to IL_4V88_444
- Geometric discrepancy: 0.128
- The information below is about IL_4V88_444
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7RR5|1|C2|C|1173
7RR5|1|C2|C|1174
7RR5|1|C2|U|1175
*
7RR5|1|C2|G|1464
7RR5|1|C2|C|1465
7RR5|1|C2|G|1466
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain P
- Transfer RNA; tRNA
- Chain SQ
- 40S ribosomal protein S16-A
- Chain SS
- 40S ribosomal protein S18-B
- Chain ST
- 40S ribosomal protein S19-A
- Chain SU
- RPS20 isoform 1
- Chain SZ
- RPS25A isoform 1
Coloring options: