IL_7RR5_244
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- CAUA*UAAGCG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_244 not in the Motif Atlas
- Homologous match to IL_8P9A_338
- Geometric discrepancy: 0.1236
- The information below is about IL_8P9A_338
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_07469.2
- Basepair signature
- cWW-tSH-cWW-cSH-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
7RR5|1|C1|C|2889
7RR5|1|C1|A|2890
7RR5|1|C1|U|2891
7RR5|1|C1|A|2892
*
7RR5|1|C1|U|2909
7RR5|1|C1|A|2910
7RR5|1|C1|A|2911
7RR5|1|C1|G|2912
7RR5|1|C1|C|2913
7RR5|1|C1|G|2914
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain LB
- RPL3 isoform 1
- Chain LH
- 60S ribosomal protein L9-A
- Chain LO
- 60S ribosomal protein L16-A
- Chain LV
- 60S ribosomal protein L23-B
- Chain Lm
- Ubiquitin-60S ribosomal protein L40
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