IL_7RYF_042
3D structure
- PDB id
- 7RYF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- GUGAGUAA*UGAAAUC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RYF_042 not in the Motif Atlas
- Homologous match to IL_5J7L_289
- Geometric discrepancy: 0.1014
- The information below is about IL_5J7L_289
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7RYF|1|A|G|1257
7RYF|1|A|U|1258
7RYF|1|A|G|1259
7RYF|1|A|A|1260
7RYF|1|A|G|1261
7RYF|1|A|U|1262
7RYF|1|A|A|1263
7RYF|1|A|A|1264
*
7RYF|1|A|U|2007
7RYF|1|A|G|2008
7RYF|1|A|A|2009
7RYF|1|A|A|2010
7RYF|1|A|A|2011
7RYF|1|A|U|2012
7RYF|1|A|C|2013
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain R
- 50S ribosomal protein L22
- Chain Z
- 50S ribosomal protein L32
Coloring options: