IL_7RYF_079

3D structure

PDB id

7RYF (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

AG*CCU

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYF_079 not in the Motif Atlas

Homologous match to IL_4WF9_089

Geometric discrepancy: 0.1541

The information below is about IL_4WF9_089

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_15011.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

61

Unit IDs

7RYF|1|A|A|2449
7RYF|1|A|G|2450
*
7RYF|1|A|C|2494
7RYF|1|A|C|2495
7RYF|1|A|U|2496

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3