IL_7RYF_163

3D structure

PDB id

7RYF (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7RYF|1|a|C|1397, 7RYF|1|a|A|1500

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYF_163 not in the Motif Atlas

Homologous match to IL_6CZR_165

Geometric discrepancy: 0.1819

The information below is about IL_6CZR_165

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

7RYF|1|a|C|1396
7RYF|1|a|C|1397
7RYF|1|a|G|1398
*
7RYF|1|a|C|1498
7RYF|1|a|A|1499
7RYF|1|a|A|1500
7RYF|1|a|G|1501

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain v

Transfer RNA; tRNA

Chain w

mRNA