IL_7RYF_193
3D structure
- PDB id
- 7RYF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- AUCCC*GAACU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RYF_193 not in the Motif Atlas
- Homologous match to IL_9DFE_113
- Geometric discrepancy: 0.2591
- The information below is about IL_9DFE_113
- Detailed Annotation
- Symmetric double minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_58103.13
- Basepair signature
- cWW-cSH-cWS-L-tSW-R-R-cWW
- Number of instances in this motif group
- 13
Unit IDs
7RYF|1|B|A|32
7RYF|1|B|U|33
7RYF|1|B|C|34
7RYF|1|B|C|35
7RYF|1|B|C|36
*
7RYF|1|B|G|42
7RYF|1|B|A|43
7RYF|1|B|A|44
7RYF|1|B|C|45
7RYF|1|B|U|46
Current chains
- Chain B
- 5S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
- Chain N
- 50S ribosomal protein L18
Coloring options: