IL_7RYG_040

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CGU*AGUG

Length

7 nucleotides

Bulged bases

7RYG|1|A|G|1243

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYG_040 not in the Motif Atlas

Homologous match to IL_4WF9_044

Geometric discrepancy: 0.0909

The information below is about IL_4WF9_044

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_42997.4

Basepair signature

cWW-cWS-cWW

Number of instances in this motif group

21

Unit IDs

7RYG|1|A|C|1191
7RYG|1|A|G|1192
7RYG|1|A|U|1193
*
7RYG|1|A|A|1242
7RYG|1|A|G|1243
7RYG|1|A|U|1244
7RYG|1|A|G|1245

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain K

50S ribosomal protein L15

Chain P

50S ribosomal protein L20