IL_7RYG_168

3D structure

PDB id

7RYG (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CAC*GAAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYG_168 not in the Motif Atlas

Geometric match to IL_6DME_003

Geometric discrepancy: 0.3002

The information below is about IL_6DME_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75527.1

Basepair signature

cWW-cWW-cSH-cWW

Number of instances in this motif group

10

Unit IDs

7RYG|1|a|C|1404
7RYG|1|a|A|1405
7RYG|1|a|C|1406
*
7RYG|1|a|G|1488
7RYG|1|a|A|1489
7RYG|1|a|A|1490
7RYG|1|a|G|1491

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S12