IL_7RYH_006
3D structure
- PDB id
- 7RYH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-TP-6076 complex: Empty 70S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.43 Å
Loop
- Sequence
- GGAAGUG*CUCAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RYH_006 not in the Motif Atlas
- Homologous match to IL_5J7L_250
- Geometric discrepancy: 0.1074
- The information below is about IL_5J7L_250
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7RYH|1|A|G|195
7RYH|1|A|G|196
7RYH|1|A|A|197
7RYH|1|A|A|198
7RYH|1|A|G|199
7RYH|1|A|U|200
7RYH|1|A|G|201
*
7RYH|1|A|C|208
7RYH|1|A|U|209
7RYH|1|A|C|210
7RYH|1|A|A|211
7RYH|1|A|G|212
7RYH|1|A|U|213
7RYH|1|A|A|214
7RYH|1|A|C|215
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain K
- 50S ribosomal protein L15
- Chain W
- 50S ribosomal protein L28
Coloring options: