IL_7RYH_064

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYH_064 not in the Motif Atlas

Homologous match to IL_5J7L_317

Geometric discrepancy: 0.4229

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN variation

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

7RYH|1|A|U|1860
7RYH|1|A|U|1861
7RYH|1|A|A|1862
7RYH|1|A|G|1863
*
7RYH|1|A|C|1870
7RYH|1|A|G|1871
7RYH|1|A|A|1872
7RYH|1|A|A|1873
7RYH|1|A|G|1874

Current chains

Chain A

23S ribosomal RNA

Nearby chains