IL_7RYH_098
3D structure
- PDB id
- 7RYH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-TP-6076 complex: Empty 70S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.43 Å
Loop
- Sequence
- GAUG*CUGAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RYH_098 not in the Motif Atlas
- Homologous match to IL_5J7L_353
- Geometric discrepancy: 0.1998
- The information below is about IL_5J7L_353
- Detailed Annotation
- Multiple bulged bases with non-canonical cWW
- Broad Annotation
- Multiple bulged bases with non-canonical cWW
- Motif group
- IL_64231.5
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
7RYH|1|A|G|2839
7RYH|1|A|A|2840
7RYH|1|A|U|2841
7RYH|1|A|G|2842
*
7RYH|1|A|C|2866
7RYH|1|A|U|2867
7RYH|1|A|G|2868
7RYH|1|A|A|2869
7RYH|1|A|C|2870
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain M
- 50S ribosomal protein L17
- Chain O
- 50S ribosomal protein L19
Coloring options: