IL_7RYH_141

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GAC*GUAC

Length

7 nucleotides

Bulged bases

7RYH|1|a|A|1391

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYH_141 not in the Motif Atlas

Geometric match to IL_4V9F_097

Geometric discrepancy: 0.2453

The information below is about IL_4V9F_097

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_68118.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

27

Unit IDs

7RYH|1|a|G|919
7RYH|1|a|A|920
7RYH|1|a|C|921
*
7RYH|1|a|G|1389
7RYH|1|a|U|1390
7RYH|1|a|A|1391
7RYH|1|a|C|1392

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain e

30S ribosomal protein S5