3D structure

PDB id
7RYH (explore in PDB, NAKB, or RNA 3D Hub)
Description
A. baumannii Ribosome-TP-6076 complex: Empty 70S
Experimental method
ELECTRON MICROSCOPY
Resolution
2.43 Å

Loop

Sequence
CUAG*CGG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7RYH_168 not in the Motif Atlas
Geometric match to IL_7RQB_093
Geometric discrepancy: 0.2555
The information below is about IL_7RQB_093
Detailed Annotation
Major groove platform with extra pair
Broad Annotation
Major groove platform
Motif group
IL_63450.2
Basepair signature
cWW-cWW-cSH-cWW
Number of instances in this motif group
8

Unit IDs

7RYH|1|a|C|1436
7RYH|1|a|U|1437
7RYH|1|a|A|1438
7RYH|1|a|G|1439
*
7RYH|1|a|C|1457
7RYH|1|a|G|1458
7RYH|1|a|G|1459

Current chains

Chain a
16S Ribosomal RNA

Nearby chains

Chain O
50S ribosomal protein L19
Chain t
30S ribosomal protein S20

Coloring options:


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