IL_7RYH_175

3D structure

PDB id

7RYH (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-TP-6076 complex: Empty 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.43 Å

Loop

Sequence

GAAGG*CCC

Length

8 nucleotides

Bulged bases

7RYH|1|A|A|1844

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RYH_175 not in the Motif Atlas

Geometric match to IL_7EL1_001

Geometric discrepancy: 0.2231

The information below is about IL_7EL1_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36516.3

Basepair signature

cWW-cWW-cSH-cWW-L

Number of instances in this motif group

7

Unit IDs

7RYH|1|A|G|1842
7RYH|1|A|A|1843
7RYH|1|A|A|1844
7RYH|1|A|G|1845
7RYH|1|A|G|1846
*
7RYH|1|A|C|1888
7RYH|1|A|C|1889
7RYH|1|A|C|1890

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain a

Small subunit ribosomal RNA; SSU rRNA