IL_7S1I_041

3D structure

PDB id

7S1I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli stalled ribosome with antibiotic radezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

7S1I|1|C|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S1I_041 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.0915

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

7S1I|1|C|G|925
7S1I|1|C|G|926
7S1I|1|C|G|927
*
7S1I|1|C|U|1390
7S1I|1|C|U|1391

Current chains

Chain C

16S rRNA

Nearby chains

Chain 4

mRNA