IL_7S1J_065
3D structure
- PDB id
- 7S1J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wild-type Escherichia coli ribosome with antibiotic radezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- UAG*CG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7S1J_065 not in the Motif Atlas
- Homologous match to IL_5J7L_064
- Geometric discrepancy: 0.2244
- The information below is about IL_5J7L_064
- Detailed Annotation
- Single bulged A
- Broad Annotation
- Single bulged A
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
7S1J|1|C|U|1440
7S1J|1|C|A|1441
7S1J|1|C|G|1442
*
7S1J|1|C|C|1460
7S1J|1|C|G|1461
Current chains
- Chain C
- 16S rRNA
Nearby chains
- Chain 2
- 30S ribosomal protein S20
- Chain X
- 50S ribosomal protein L19
Coloring options: