IL_7S1J_123

3D structure

PDB id

7S1J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Wild-type Escherichia coli ribosome with antibiotic radezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

UG*CAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S1J_123 not in the Motif Atlas

Homologous match to IL_5J7L_301

Geometric discrepancy: 0.2459

The information below is about IL_5J7L_301

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_00881.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

7S1J|1|I|U|1481
7S1J|1|I|G|1482
*
7S1J|1|I|C|1507
7S1J|1|I|A|1508
7S1J|1|I|A|1509
7S1J|1|I|G|1510

Current chains

Chain I

23S rRNA

Nearby chains