3D structure

PDB id
7S1J (explore in PDB, NAKB, or RNA 3D Hub)
Description
Wild-type Escherichia coli ribosome with antibiotic radezolid
Experimental method
ELECTRON MICROSCOPY
Resolution
2.47 Å

Loop

Sequence
GGAG*CGACCUUGAAAUAC
Length
18 nucleotides
Bulged bases
7S1J|1|I|U|2172
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7S1J|1|I|G|2124
7S1J|1|I|G|2125
7S1J|1|I|A|2126
7S1J|1|I|G|2127
*
7S1J|1|I|C|2161
7S1J|1|I|G|2162
7S1J|1|I|A|2163
7S1J|1|I|C|2164
7S1J|1|I|C|2165
7S1J|1|I|U|2166
7S1J|1|I|U|2167
7S1J|1|I|G|2168
7S1J|1|I|A|2169
7S1J|1|I|A|2170
7S1J|1|I|A|2171
7S1J|1|I|U|2172
7S1J|1|I|A|2173
7S1J|1|I|C|2174

Current chains

Chain I
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

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