IL_7S1J_173
3D structure
- PDB id
- 7S1J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wild-type Escherichia coli ribosome with antibiotic radezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CUGAAG*CGUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7S1J_173 not in the Motif Atlas
- Geometric match to IL_5J7L_351
- Geometric discrepancy: 0.1056
- The information below is about IL_5J7L_351
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_29471.1
- Basepair signature
- cWW-cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
7S1J|1|I|C|2806
7S1J|1|I|U|2807
7S1J|1|I|G|2808
7S1J|1|I|A|2809
7S1J|1|I|A|2810
7S1J|1|I|G|2811
*
7S1J|1|I|C|2889
7S1J|1|I|G|2890
7S1J|1|I|U|2891
7S1J|1|I|G|2892
Current chains
- Chain I
- 23S rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L3
- Chain a
- 50S ribosomal protein L22
- Chain i
- 50S ribosomal protein L32
Coloring options: