3D structure

PDB id
7S1K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid
Experimental method
ELECTRON MICROSCOPY
Resolution
2.42 Å

Loop

Sequence
UG*CAUCAG
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7S1K_116 not in the Motif Atlas
Homologous match to IL_5J7L_294
Geometric discrepancy: 0.2991
The information below is about IL_5J7L_294
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_87211.1
Basepair signature
cWW-cSW-L-cWW-L
Number of instances in this motif group
1

Unit IDs

7S1K|1|I|U|1415
7S1K|1|I|G|1416
*
7S1K|1|I|C|1582
7S1K|1|I|A|1583
7S1K|1|I|U|1584
7S1K|1|I|C|1585
7S1K|1|I|A|1586
7S1K|1|I|G|1587

Current chains

Chain I
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.4485 s