IL_7S1K_134

3D structure

PDB id

7S1K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

GC*GAU

Length

5 nucleotides

Bulged bases

7S1K|1|I|A|1981

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S1K_134 not in the Motif Atlas

Homologous match to IL_7A0S_064

Geometric discrepancy: 0.0997

The information below is about IL_7A0S_064

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

7S1K|1|I|G|1770
7S1K|1|I|C|1771
*
7S1K|1|I|G|1980
7S1K|1|I|A|1981
7S1K|1|I|U|1982

Current chains

Chain I

23S rRNA

Nearby chains

Chain K

50S ribosomal protein L2