IL_7S9U_011

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAG*CC

Length

5 nucleotides

Bulged bases

7S9U|1|A|A|345

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S9U_011 not in the Motif Atlas

Geometric match to IL_7A0S_012

Geometric discrepancy: 0.3333

The information below is about IL_7A0S_012

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

134

Unit IDs

7S9U|1|A|G|344
7S9U|1|A|A|345
7S9U|1|A|G|346
*
7S9U|1|A|C|359
7S9U|1|A|C|360

Current chains

Chain A

RNA (2436-MER)

Nearby chains

Chain U

50S ribosomal protein L24