IL_7S9U_040
3D structure
- PDB id
- 7S9U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 44SR3C ribosomal particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAC*GAC
- Length
- 6 nucleotides
- Bulged bases
- 7S9U|1|A|A|1260
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7S9U_040 not in the Motif Atlas
- Homologous match to IL_4WF9_047
- Geometric discrepancy: 0.1699
- The information below is about IL_4WF9_047
- Detailed Annotation
- Intercalated cWW
- Broad Annotation
- Intercalated cWW
- Motif group
- IL_53541.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
7S9U|1|A|G|1259
7S9U|1|A|A|1260
7S9U|1|A|C|1261
*
7S9U|1|A|G|1268
7S9U|1|A|A|1269
7S9U|1|A|C|1270
Current chains
- Chain A
- RNA (2436-MER)
Nearby chains
- Chain Q
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L21
Coloring options: