IL_7S9U_043

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAAG*CGC

Length

8 nucleotides

Bulged bases

7S9U|1|A|G|1371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S9U_043 not in the Motif Atlas

Homologous match to IL_7A0S_047

Geometric discrepancy: 0.2535

The information below is about IL_7A0S_047

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_06671.2

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

11

Unit IDs

7S9U|1|A|G|1358
7S9U|1|A|G|1359
7S9U|1|A|A|1360
7S9U|1|A|A|1361
7S9U|1|A|G|1362
*
7S9U|1|A|C|1370
7S9U|1|A|G|1371
7S9U|1|A|C|1372

Current chains

Chain A

RNA (2436-MER)

Nearby chains

Chain S

50S ribosomal protein L22

Chain T

50S ribosomal protein L23