IL_7S9U_044

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S9U_044 not in the Motif Atlas

Homologous match to IL_7A0S_048

Geometric discrepancy: 0.0912

The information below is about IL_7A0S_048

Detailed Annotation

UAA/GAN

Broad Annotation

UAA/GAN

Motif group

IL_89021.3

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

7

Unit IDs

7S9U|1|A|C|1390
7S9U|1|A|U|1391
7S9U|1|A|A|1392
7S9U|1|A|A|1393
7S9U|1|A|G|1394
*
7S9U|1|A|C|1415
7S9U|1|A|G|1416
7S9U|1|A|A|1417
7S9U|1|A|U|1418
7S9U|1|A|G|1419

Current chains

Chain A

RNA (2436-MER)

Nearby chains

Chain C

50S ribosomal protein L2

Chain d

50S ribosomal protein L34