IL_7S9U_045
3D structure
- PDB id
- 7S9U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 44SR3C ribosomal particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAGG*CGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7S9U_045 not in the Motif Atlas
- Homologous match to IL_4WF9_052
- Geometric discrepancy: 0.1127
- The information below is about IL_4WF9_052
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.2
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
7S9U|1|A|C|1396
7S9U|1|A|G|1397
7S9U|1|A|A|1398
7S9U|1|A|G|1399
7S9U|1|A|G|1400
*
7S9U|1|A|C|1409
7S9U|1|A|G|1410
7S9U|1|A|U|1411
7S9U|1|A|A|1412
7S9U|1|A|G|1413
Current chains
- Chain A
- RNA (2436-MER)
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain d
- 50S ribosomal protein L34
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