IL_7S9U_060

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

7S9U|1|A|G|1744

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S9U_060 not in the Motif Atlas

Geometric match to IL_4V9F_063

Geometric discrepancy: 0.1366

The information below is about IL_4V9F_063

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_20700.2

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

11

Unit IDs

7S9U|1|A|C|1731
7S9U|1|A|G|1732
7S9U|1|A|U|1733
7S9U|1|A|A|1734
7S9U|1|A|A|1735
7S9U|1|A|C|1736
*
7S9U|1|A|G|1741
7S9U|1|A|G|1742
7S9U|1|A|A|1743
7S9U|1|A|G|1744
7S9U|1|A|A|1745
7S9U|1|A|A|1746
7S9U|1|A|G|1747

Current chains

Chain A

RNA (2436-MER)

Nearby chains

Chain C

50S ribosomal protein L2