IL_7S9U_061

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGUUAG*CGAGA

Length

11 nucleotides

Bulged bases

7S9U|1|A|U|1758

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S9U_061 not in the Motif Atlas

Geometric match to IL_5J7L_022

Geometric discrepancy: 0.2126

The information below is about IL_5J7L_022

Detailed Annotation

tSH-tHW-tWW

Broad Annotation

No text annotation

Motif group

IL_88269.4

Basepair signature

cWW-tWW-cSH-tWH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7S9U|1|A|U|1756
7S9U|1|A|G|1757
7S9U|1|A|U|1758
7S9U|1|A|U|1759
7S9U|1|A|A|1760
7S9U|1|A|G|1761
*
7S9U|1|A|C|1772
7S9U|1|A|G|1773
7S9U|1|A|A|1774
7S9U|1|A|G|1775
7S9U|1|A|A|1776

Current chains

Chain A

RNA (2436-MER)

Nearby chains