IL_7S9U_092

3D structure

PDB id

7S9U (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR3C ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCACU*AAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S9U_092 not in the Motif Atlas

Homologous match to IL_7A0S_029

Geometric discrepancy: 0.2832

The information below is about IL_7A0S_029

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_16301.2

Basepair signature

cWW-cWS-tWH-R-L-R-cWW

Number of instances in this motif group

10

Unit IDs

7S9U|1|A|G|911
7S9U|1|A|C|912
7S9U|1|A|A|913
7S9U|1|A|C|914
7S9U|1|A|U|915
*
7S9U|1|A|A|956
7S9U|1|A|A|957
7S9U|1|A|A|958
7S9U|1|A|C|959

Current chains

Chain A

RNA (2436-MER)

Nearby chains