IL_7SA4_085

3D structure

PDB id

7SA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Damaged 70S ribosome with PrfH bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

GGAG*CGACCUUGAAAUAC

Length

18 nucleotides

Bulged bases

7SA4|1|1|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7SA4|1|1|G|2124
7SA4|1|1|G|2125
7SA4|1|1|A|2126
7SA4|1|1|G|2127
*
7SA4|1|1|C|2161
7SA4|1|1|G|2162
7SA4|1|1|A|2163
7SA4|1|1|C|2164
7SA4|1|1|C|2165
7SA4|1|1|U|2166
7SA4|1|1|U|2167
7SA4|1|1|G|2168
7SA4|1|1|A|2169
7SA4|1|1|A|2170
7SA4|1|1|A|2171
7SA4|1|1|U|2172
7SA4|1|1|A|2173
7SA4|1|1|C|2174

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 6

Transfer RNA; tRNA