IL_7SAE_001
3D structure
- PDB id
- 7SAE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 44SR70P Class1 ribosomal particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SAE_001 not in the Motif Atlas
- Geometric match to IL_4WF9_001
- Geometric discrepancy: 0.0926
- The information below is about IL_4WF9_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_22311.1
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
7SAE|1|A|G|24
7SAE|1|A|U|25
7SAE|1|A|G|26
7SAE|1|A|G|27
7SAE|1|A|A|28
7SAE|1|A|U|29
7SAE|1|A|G|30
*
7SAE|1|A|C|556
7SAE|1|A|U|557
7SAE|1|A|G|558
7SAE|1|A|A|559
7SAE|1|A|A|560
7SAE|1|A|A|561
7SAE|1|A|C|562
Current chains
- Chain A
- RNA (2434-MER)
Nearby chains
- Chain Q
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L22
- Chain b
- 50S ribosomal protein L32
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