IL_7SAE_013

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAG*CC

Length

5 nucleotides

Bulged bases

7SAE|1|A|A|345

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SAE_013 not in the Motif Atlas

Geometric match to IL_7A0S_012

Geometric discrepancy: 0.316

The information below is about IL_7A0S_012

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

7SAE|1|A|G|344
7SAE|1|A|A|345
7SAE|1|A|G|346
*
7SAE|1|A|C|359
7SAE|1|A|C|360

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain U

50S ribosomal protein L24