IL_7SAE_038

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUAAGUG*CUAAA

Length

12 nucleotides

Bulged bases

7SAE|1|A|A|1189

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SAE_038 not in the Motif Atlas

Homologous match to IL_4WF9_039

Geometric discrepancy: 0.1288

The information below is about IL_4WF9_039

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_57188.6

Basepair signature

cWW-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

6

Unit IDs

7SAE|1|A|U|1064
7SAE|1|A|U|1065
7SAE|1|A|A|1066
7SAE|1|A|A|1067
7SAE|1|A|G|1068
7SAE|1|A|U|1069
7SAE|1|A|G|1070
*
7SAE|1|A|C|1186
7SAE|1|A|U|1187
7SAE|1|A|A|1188
7SAE|1|A|A|1189
7SAE|1|A|A|1190

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain J

50S ribosomal protein L13