IL_7SAE_040

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAUG*CGC

Length

7 nucleotides

Bulged bases

7SAE|1|A|U|1079

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SAE_040 not in the Motif Atlas

Homologous match to IL_7A0S_038

Geometric discrepancy: 0.2424

The information below is about IL_7A0S_038

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_30229.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

9

Unit IDs

7SAE|1|A|G|1077
7SAE|1|A|A|1078
7SAE|1|A|U|1079
7SAE|1|A|G|1080
*
7SAE|1|A|C|1167
7SAE|1|A|G|1168
7SAE|1|A|C|1169

Current chains

Chain A

RNA (2434-MER)

Nearby chains