IL_7SAE_064

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

7SAE|1|A|G|1744

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SAE_064 not in the Motif Atlas

Homologous match to IL_7RQB_068

Geometric discrepancy: 0.1055

The information below is about IL_7RQB_068

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_65969.2

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

7SAE|1|A|C|1731
7SAE|1|A|G|1732
7SAE|1|A|U|1733
7SAE|1|A|A|1734
7SAE|1|A|A|1735
7SAE|1|A|C|1736
*
7SAE|1|A|G|1741
7SAE|1|A|G|1742
7SAE|1|A|A|1743
7SAE|1|A|G|1744
7SAE|1|A|A|1745
7SAE|1|A|A|1746
7SAE|1|A|G|1747

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain C

50S ribosomal protein L2