IL_7SAE_069

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAG*CUACCC

Length

9 nucleotides

Bulged bases

7SAE|1|A|A|2468, 7SAE|1|A|C|2469

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SAE_069 not in the Motif Atlas

Geometric match to IL_4V9F_053

Geometric discrepancy: 0.396

The information below is about IL_4V9F_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49140.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

7SAE|1|A|G|2099
7SAE|1|A|A|2100
7SAE|1|A|G|2101
*
7SAE|1|A|C|2466
7SAE|1|A|U|2467
7SAE|1|A|A|2468
7SAE|1|A|C|2469
7SAE|1|A|C|2470
7SAE|1|A|C|2471

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain C

50S ribosomal protein L2