IL_7SFR_020

3D structure

PDB id

7SFR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmethylated Mtb Ribosome 50S with SEQ-9

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GGG*UC

Length

5 nucleotides

Bulged bases

7SFR|1|A|G|694

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7SFR_020 not in the Motif Atlas

Geometric match to IL_7RQB_020

Geometric discrepancy: 0.3386

The information below is about IL_7RQB_020

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

42

Unit IDs

7SFR|1|A|G|693
7SFR|1|A|G|694
7SFR|1|A|G|695
*
7SFR|1|A|U|794
7SFR|1|A|C|795

Current chains

Chain A

23S rRNA

Nearby chains

Chain 3

50S ribosomal protein L35

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15