IL_7SFR_035
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CCGAUG*CUGACG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SFR_035 not in the Motif Atlas
- Geometric match to IL_4V88_462
- Geometric discrepancy: 0.289
- The information below is about IL_4V88_462
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82488.1
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
7SFR|1|A|C|1005
7SFR|1|A|C|1006
7SFR|1|A|G|1007
7SFR|1|A|A|1008
7SFR|1|A|U|1009
7SFR|1|A|G|1010
*
7SFR|1|A|C|1026
7SFR|1|A|U|1027
7SFR|1|A|G|1028
7SFR|1|A|A|1029
7SFR|1|A|C|1030
7SFR|1|A|G|1031
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain M
- 50S ribosomal protein L16
Coloring options: