IL_7SFR_076
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UGCGAAG*CGAUGUAUA
- Length
- 16 nucleotides
- Bulged bases
- 7SFR|1|A|G|2035, 7SFR|1|A|U|2050, 7SFR|1|A|U|2054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SFR_076 not in the Motif Atlas
- Geometric match to IL_7RQB_070
- Geometric discrepancy: 0.0796
- The information below is about IL_7RQB_070
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_17069.3
- Basepair signature
- cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7SFR|1|A|U|2032
7SFR|1|A|G|2033
7SFR|1|A|C|2034
7SFR|1|A|G|2035
7SFR|1|A|A|2036
7SFR|1|A|A|2037
7SFR|1|A|G|2038
*
7SFR|1|A|C|2047
7SFR|1|A|G|2048
7SFR|1|A|A|2049
7SFR|1|A|U|2050
7SFR|1|A|G|2051
7SFR|1|A|U|2052
7SFR|1|A|A|2053
7SFR|1|A|U|2054
7SFR|1|A|A|2055
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: