IL_7SFR_098
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SFR_098 not in the Motif Atlas
- Geometric match to IL_4WF9_093
- Geometric discrepancy: 0.1301
- The information below is about IL_4WF9_093
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.4
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
7SFR|1|A|C|2704
7SFR|1|A|C|2705
7SFR|1|A|A|2706
7SFR|1|A|A|2707
7SFR|1|A|G|2708
*
7SFR|1|A|C|2718
7SFR|1|A|G|2719
7SFR|1|A|A|2720
7SFR|1|A|C|2721
7SFR|1|A|G|2722
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain M
- 50S ribosomal protein L16
Coloring options: