IL_7SS9_139
3D structure
- PDB id
- 7SS9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late translocation intermediate with EF-G partially dissociated (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGUGUAG*CGUAGAGAUC
- Length
- 17 nucleotides
- Bulged bases
- 7SS9|1|3|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SS9_139 not in the Motif Atlas
- Geometric match to IL_4V88_508
- Geometric discrepancy: 0.3433
- The information below is about IL_4V88_508
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99095.1
- Basepair signature
- cWW-tSS-L-tSH-L-R-R-R-L-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
7SS9|1|3|G|682
7SS9|1|3|G|683
7SS9|1|3|U|684
7SS9|1|3|G|685
7SS9|1|3|U|686
7SS9|1|3|A|687
7SS9|1|3|G|688
*
7SS9|1|3|C|699
7SS9|1|3|G|700
7SS9|1|3|U|701
7SS9|1|3|A|702
7SS9|1|3|G|703
7SS9|1|3|A|704
7SS9|1|3|G|705
7SS9|1|3|A|706
7SS9|1|3|U|707
7SS9|1|3|C|708
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain P
- 30S ribosomal protein S11
- Chain W
- 30S ribosomal protein S18
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