3D structure

PDB id
7SS9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Late translocation intermediate with EF-G partially dissociated (Structure V)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GGAAG*UGUGCCUUCGGGAACC
Length
21 nucleotides
Bulged bases
7SS9|1|3|U|1030, 7SS9|1|3|G|1032
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7SS9|1|3|G|1002
7SS9|1|3|G|1003
7SS9|1|3|A|1004
7SS9|1|3|A|1005
7SS9|1|3|G|1006
*
7SS9|1|3|U|1023
7SS9|1|3|G|1024
7SS9|1|3|U|1025
7SS9|1|3|G|1026
7SS9|1|3|C|1027
7SS9|1|3|C|1028
7SS9|1|3|U|1029
7SS9|1|3|U|1030
7SS9|1|3|C|1031
7SS9|1|3|G|1032
7SS9|1|3|G|1033
7SS9|1|3|G|1034
7SS9|1|3|A|1035
7SS9|1|3|A|1036
7SS9|1|3|C|1037
7SS9|1|3|C|1038

Current chains

Chain 3
16S rRNA

Nearby chains

Chain S
30S ribosomal protein S14

Coloring options:

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