IL_7SS9_150
3D structure
- PDB id
- 7SS9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late translocation intermediate with EF-G partially dissociated (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUGCAU*AUGG
- Length
- 10 nucleotides
- Bulged bases
- 7SS9|1|3|C|1054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SS9_150 not in the Motif Atlas
- Geometric match to IL_5UNE_005
- Geometric discrepancy: 0.324
- The information below is about IL_5UNE_005
- Detailed Annotation
- tSH-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
7SS9|1|3|C|1051
7SS9|1|3|U|1052
7SS9|1|3|G|1053
7SS9|1|3|C|1054
7SS9|1|3|A|1055
7SS9|1|3|U|1056
*
7SS9|1|3|A|1204
7SS9|1|3|U|1205
7SS9|1|3|G|1206
7SS9|1|3|G|1207
Current chains
- Chain 3
- 16S rRNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
- Chain 8
- Elongation factor G
- Chain H
- 30S ribosomal protein S3
- Chain O
- 30S ribosomal protein S10
- Chain S
- 30S ribosomal protein S14
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