IL_7SS9_185
3D structure
- PDB id
- 7SS9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late translocation intermediate with EF-G partially dissociated (Structure V)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCGAAAUUCCUUG*CCUGCAC
- Length
- 20 nucleotides
- Bulged bases
- 7SS9|1|1|A|1938, 7SS9|1|1|U|1944, 7SS9|1|1|U|1963
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7SS9|1|1|G|1933
7SS9|1|1|C|1934
7SS9|1|1|G|1935
7SS9|1|1|A|1936
7SS9|1|1|A|1937
7SS9|1|1|A|1938
7SS9|1|1|U|1939
7SS9|1|1|U|1940
7SS9|1|1|C|1941
7SS9|1|1|C|1942
7SS9|1|1|U|1943
7SS9|1|1|U|1944
7SS9|1|1|G|1945
*
7SS9|1|1|C|1961
7SS9|1|1|C|1962
7SS9|1|1|U|1963
7SS9|1|1|G|1964
7SS9|1|1|C|1965
7SS9|1|1|A|1966
7SS9|1|1|C|1967
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 5
- Transfer RNA; tRNA
- Chain b
- 50S ribosomal protein L2
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